../ addgenesandtranscriptstogtf_2.11/ - - annotatevcfwithbed_2.11/ - - bamstats_2.11/ - - basecounter_2.11/ - - bastygeneratefasta_2.11/ - - biowdl-test-utils_2.11/ - - biowdl-test-utils_2.12/ - - common-utils_2.11/ - - common-utils_2.12/ - - correctrefalleles_2.11/ - - countalleles_2.11/ - - digenicsearch_2.11/ - - downloadncbiassembly_2.11/ - - downsampleregions_2.11/ - - extractadaptersfastqc_2.11/ - - extractalignedfastq_2.11/ - - extracttagsfromgtf_2.11/ - - fastqsplitter_2.11/ - - fastqsync_2.11/ - - findoverlapmatch_2.11/ - - gtftorefflat_2.11/ - - gvcftobed_2.11/ - - krakenreporttojson_2.11/ - - mergeotumaps_2.11/ - - mergesv_2.11/ - - mpileuptovcf_2.11/ - - multicoverage_2.11/ - - ncbireporttocontigmap_2.11/ - - ngs-utils_2.11/ - - ngs-utils_2.12/ - - pipelinestatus_2.11/ - - rebuildcontigmap_2.11/ - - refflatstats_2.11/ - - replacecontigsgtffile_2.11/ - - replacecontigsvcffile_2.11/ - - sampleconfig_2.11/ - - samples-tsv-to-config_2.11/ - - samplestsvtoconfig_2.11/ - - sampletsvtoconfig_2.11/ - - sbt-bioconda_2.12_1.0/ - - sbt-biopet_2.10_0.13/ - - sbt-biopet_2.12_1.0/ - - scatterregions_2.11/ - - seqstat_2.11/ - - snptesttovcf_2.11/ - - spark-utils_2.11/ - - squishbed_2.11/ - - tenxkit_2.11/ - - test-utils_2.11/ - - test-utils_2.12/ - - tool-test-utils_2.11/ - - tool-test-utils_2.12/ - - tool-utils_2.11/ - - tool-utils_2.12/ - - toolspackage_2.11/ - - tooltemplate_2.11/ - - tooltemplate_2.12/ - - validateannotation_2.11/ - - validatefastq_2.11/ - - validatevcf_2.11/ - - vcffilter_2.11/ - - vcfstats_2.11/ - - vcftotsv_2.11/ - - vcfwithvcf_2.11/ - - vepnormalizer_2.11/ - - wipereads_2.11/ - - xcnvtobed_2.11/ - -